PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn046361
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family Nin-like
Protein Properties Length: 460aa    MW: 52531.9 Da    PI: 6.1716
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn046361genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK33.21e-101701982452
      RWP-RK  24 eLgvclTvLKriCRqyGIkRWPhRkiksl 52 
                 +L ++ ++ Kr CR+yGI+RWP R + +l
  Achn046361 170 KLSLSISTFKRVCRKYGINRWPPRNVDKL 198
                 6889999******************9986 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5151911.229128218IPR003035RWP-RK domain
SMARTSM006661.1E-7157264IPR000270PB1 domain
PfamPF020426.7E-8170198IPR003035RWP-RK domain
PROSITE profilePS5174518.625178264IPR000270PB1 domain
PfamPF005641.3E-12197262IPR000270PB1 domain
SuperFamilySSF542775.61E-14199266No hitNo description
Gene3DG3DSA:3.10.20.2401.8E-13200262No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 460 aa     Download sequence    Send to blast
MAEYPLAHFA RKYRLKGCFA INLRSKYTGN DDYVLEIFLP DSNKDKDPLS SLSKILETMK  60
KEFITFTLAY GEVMEKELFV DIIEFQNGEQ HHYVQALQVT GSLPSLEPLQ NGGEIIQVDS  120
SDHQSIHAEQ CVIDVNHPQE LGTKKTSGRE HKNTGVSIEI PFEDIVKYSK LSLSISTFKR  180
VCRKYGINRW PPRNVDKLSM SSGLAELQQQ VAKRLNLEAG SYHIKYKDEE DELILIACDE  240
DLQDCIRTCR SPGSNAVILH IDPISQVYHT KSVTPVSYID CFPASLRPYI RHVKDVALDG  300
NCGFRAIAGL MNIGEEDGWV QVRRDLLTEL NSHVHDYKSM YEGQEMINEL THRLSWFHGC  360
SGKDRWMTMP DMGHLIASCY NVVLYHLSHQ QCLTFLPLRE IAIGFVNDNH FVEEHPEWEI  420
KNGLVIFQRA KESAPCKEIP SLQLINQTLS YARELERIV*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G64530.15e-21Nin-like family protein